Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015824369.1_cds_XP_016501876.1_15570
CDS Infomation

[gene=LOC107820163] [db_xref=GeneID:107820163] [protein=protein NRT1/ PTR FAMILY 5.5-like] [protein_id=XP_016501876.1] [location=complement(join(44238..45183,45454..45956))] [gbkey=CDS]
Sequence

ATGTCAACACCACCAGTCCTTGCTAAGGCTACTGGAACATGCAGTGGTTATCAGCCTGAG
TGCATCGGCGAAAGCCAGCGCATACTCTTCTACATAGCATTGGCTCTGTGTGCTCTGGGA
ACAGCTGGTAAAGCGGTAAGCTTACGCGCTTTCCTACTTGAGCAACTTGGAGAAAATGCT
ATCAGTCCTTCTATCTGGTCTCTGCAACGTTATGCGTTGATTCTGTTCAAAGCTGCTGCT
GTTTTGGGATTTTCATACATATCACCGTGGTCGCTTTGGTTTGGTGTCCCAGCAATATGT
TACACAGTTGCAGCCTTTATTTTCTTGAGCGGATCTTGTACCTATAAATATGTTAAACCA
GAAGGTAGCCCTATCACTACTTTATTCCGGGTCTTTGCAGCATCTATCTCCAAGTTATTC
TATCGACTGCCTACAGATGCGTTACAGCTGTATAACATATCTGACCCTGGTATACAATGC
CTGCCTCACACCAATGGCCTGAGGTGTCTTGATAAGGCTGCAATTATCTTGCCCGACCAG
ACTCTAGAGCAGCAACTGCGGAATACATGGAGGCTTTGCAGCGTTGCTGAGGTTGAAGCT
ACTAAATTTGTAATTCGCAAGTTCCCACTGTGTATGACCTACATTCTTGGTGGGGTTTTG
ACTTCTTTGTCATACACCTACTTTCTAGAGCAAGCAAAGACTATGAACAATAAGGTCGGG
AACCTAAGAATTCCTCTAGCTGTCTTCCTATGGTTCCAATTTGAAGCAAGAGAACAGTTT
CAAAAAATATATCACATATTTGTGAATTGGGGATGGGGTTCAGAAGCAAAACCATCAGCT
CCTAGAGTGGGAGTTGCAGTATCCATCATTTTGGGGGTATTATGCACTATTACTGCTGCA
AAAGTGGAGTCAAGAAGACTCGCTATGGTAAAGATCTATAGTTTAGCAGGCGAGACCGAG
GAAAAAATTCCAATGACTGTATTCTGGCTGCTTCCACAGTATCTCCTTCTTGGGGCAGCA
GACGGGATGTTTGGAAAGAGCCTGGAGGATTACTACAATAGGCACTTTGAGCCCGAATCT
ACCTCGTATATGATCAGTGCCGTCAATTTGATGCACGGGTTAGGATGTATAAGCAGCATT
TTGATAGTGTATGTAGTGAGTAAGGTTAGTCAGCTGGGAAATAAAGTAAGTTGGTTTCAG
GATACGCTGAATAAGAGTCGAGTTGATAAGTATTACTGGACTCTGTCATGGCTATTAGCT
ATTGCATTTGTTTTGTTTGTTGTCATTAGCCTGTGGTATGCTTACAGGCGATCAAAAGAA
GAAGCACAAACAGTGTATGTTGAACGAACTGTTGCCTATGTTCGGGGTGAACTAATTTAT
GGGACGACAATTACAATGGGAAACAGGCGCAGTAACAACATCATTGCCATGCTTCCTTCT
TTTGGGTAA

Peptide Sequence

PEP ID

XP_016501876.1
PEP Infomation

PREDICTED: protein NRT1/ PTR FAMILY 5.5-like [Nicotiana tabacum]
Sequence

MSTPPVLAKATGTCSGYQPECIGESQRILFYIALALCALGTAGKAVSLRAFLLEQLGENA
ISPSIWSLQRYALILFKAAAVLGFSYISPWSLWFGVPAICYTVAAFIFLSGSCTYKYVKP
EGSPITTLFRVFAASISKLFYRLPTDALQLYNISDPGIQCLPHTNGLRCLDKAAIILPDQ
TLEQQLRNTWRLCSVAEVEATKFVIRKFPLCMTYILGGVLTSLSYTYFLEQAKTMNNKVG
NLRIPLAVFLWFQFEAREQFQKIYHIFVNWGWGSEAKPSAPRVGVAVSIILGVLCTITAA
KVESRRLAMVKIYSLAGETEEKIPMTVFWLLPQYLLLGAADGMFGKSLEDYYNRHFEPES
TSYMISAVNLMHGLGCISSILIVYVVSKVSQLGNKVSWFQDTLNKSRVDKYYWTLSWLLA
IAFVLFVVISLWYAYRRSKEEAQTVYVERTVAYVRGELIYGTTITMGNRRSNNIIAMLPS
FG

Transcript Sequence

Gene sequence data has not been registered.